Regulated Operon: | ydfJ |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
ydfJ | + | 589717..591891 | COG2409R |
Operon evidence: | Northern blotting (2.2 kb transcript) |
---|---|
Reference: | Serizawa M, et al. (2005) |
Comments: |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
YdfI | Positive | -69:-30 | 589613..589651 | GAAAATTGCCCAAACGTACATGCCCGAATGTACGTTTTT |
Serizawa M, et al. (2005): HB GS FT |
SigA | Promoter | -50:+14 | 589631..589694 | CATGCCCGAATGTACGTTTTTTTCATTTCATTGTCAACTACAATGAGAAAGAATGTGATCAAGC |
Serizawa M, et al. (2005): PE |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
TGTGTAATAGAAAAAGCAGATCTTTTATGATCTGCTCTTTTGCTTATGGTAG >>>>>>>> <<<<<<<< |
ydfJ |
|