Regulated Operon: yfhS

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yfhS
- 936773..936997

yfhS-BAC  

Operon evidence: Northern blotting (0.3 kb transcript)
Reference: Yamamoto H, et al. (1999), BSORF
Comments: The promoter upstream of yfhS may be recognized by SigG instead of SigE.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigE Promoter -38:+11 937013..937061 TAGCGTATAGTTCTTTTATTTCCACAAACAATAATGGCAAGAACTTTAA Yamamoto H, et al. (1999): PE NB DB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AGCAATGAGCTGTTCACGCTCAGTTTTGATCCCTTTTT
     >>>>>       <<<<<
936501..936517
256..272
-8.8
yfhS

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai