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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yklA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yklA | ohrA | + | 1380284..1380709 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Volker U, et al. (1998) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| YkmA | Negative | -27:+3 | 1380924..1380953 | TCAAATTTAATTGTGTACAATTTAATTGTA |
Fuangthong M, et al. (2001): PE RG DP |
| SigA | Promoter | -50:+6 | 1380901..1380956 | TTTATACGCGAAAAATTGACATTTCAAATTTAATTGTGTACAATTTAATTGTATAA |
Volker U, et al. (1998): PE HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGAGGATGCCTGTACAAGGCATCCTCAATTTTTTTGATGAAGT >>>>>>>>>> <<<<<<<<<< |
yklA |
|