Regulated Operon: | ykuFG |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
ykuF | + | 1478072..1478836 | COG1028IQR | |||
ykuG | + | 1478441..1480723 |
Operon evidence: | Northern blotting (3.5 kb transcript) |
---|---|
Reference: | Matsuoka H, et al. (2006) |
Comments: |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
YsiA | Negative | -36:+27 | 1477998..1478060 | TGTGCTGACAGAGGCAGGGATATAATGATAGAATATTATTGAATGAATAATCATTCACAATTG |
Matsuoka H, et al. (2006): NB DB PE GS FT RG |
SigA | Promoter | -36:+27 | 1477998..1478060 | TGTGCTGACAGAGGCAGGGATATAATGATAGAATATTATTGAATGAATAATCATTCACAATTG |
Matsuoka H, et al. (2006): PE NB |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
GAATAAACTGCAAAACAAGCGAACGTTAAAACTGGTCGTTCGCTTGTTTTATTTTCTATTT >>>>>>>>>>>>> <<<<<<<<<<<<<< |
ykuG |
|