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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yqaF-yqaN |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yqaF | - | 2698486..2698716 | COG1476K | |||
| yqdA | yqcS, yqcA | - | 2698316..2698456 | |||
| yqaG | - | 2697673..2698242 | ||||
| yqaH | - | 2697419..2697676 | ||||
| yqaI | - | 2697095..2697289 | ||||
| yqaJ | - | 2696030..2696989 | COG5377L | |||
| yqaK | - | 2695173..2696027 | COG3723L | |||
| yqaL | - | 2694420..2695097 | ||||
| yqaM | - | 2693597..2694457 | COG1484L | |||
| yqaN | - | 2692933..2693361 | COG4570L |
| Operon evidence: | RT-PCR |
|---|---|
| Reference: | Kimura T, et al (2010) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SknR | Negative | -107:-88 | 2698804..2698824 | TTGGTAACAAAACGATACTTT |
Kimura T, et al (2010): GS |
| SknR | Negative | -67:-48 | 2698763..2698783 | AATGTAACGAATCGATACTAT |
Kimura T, et al (2010): GS |
| SknR | Negative | -43:-22 | 2698738..2698758 | TAAGTAACGAAACGTTACATT |
Kimura T, et al (2010): GS |
|