Regulated Operon: yurPONML

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yurP frlB - 3350137..3351123

 
yurO frlO - 3348788..3350056

 
yurN frlN - 3347852..3348730

 
yurM
- 3346946..3347848

 
yurL
- 3346078..3346932

 

Operon evidence: Promoter analysis
Reference: Deppe VM, et al, (2011)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
YurK Negative +1:+50 3352094..3352143 ATATAATGTTATATAACGTTATATAATAAAAACGAGGAGTGAAGGATTTG Deppe VM, et al. (2011): PE GS RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
AGCAGTGAAAAAACGAGAATACTATAAGCAGTGTCTCGTTTTTTATGCCTGTT
             >>>>>>>>>>      <<<<<<<<<
3347040..3347064
-118..-94
-9.3
 yurM

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai