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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yxkJ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yxkJ | + | 3978772..3980124 |
| Operon evidence: | Northern blotting (1.5 kb transcript) |
|---|---|
| Reference: | Yoshida K, et al. (2000), BSORF |
| Comments: | A shorter (0.7 kb) transcript was also measured. Its significance is unclear. |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| CcpA | Negative | ND | 3979777..3979799 | CAATTGCAAACGGATACAATTCA |
Miwa Y, et al. (2000): RG |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CGCAAGCAAGTTCTTCGTCAAACGAAAGAGCTTGCTTTTTTGCATGTCCA >>>>>>>>>>>>> <<<<<<<<<<<<<< |
yxkJ |
|