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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yycA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yycA | + | 4161103..4163160 | COG1807M |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Ogura M, et al. (2010) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| YclJ | Positive | -80:-30 | 4161023..4161073 | TTCTTTGAATATTTATGGTTTATTCATAAGTTTTTCATATTTGTTTTTTAC |
Ogura M, et al. (2010): HM GS OV |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CTCGTGGAATAAAAAAAGAGGCTTGGATGAATCCAAGCCTCTTTTCTATTAAGCTT >>>>>>>>>> <<<<<<<<<< |
yycA |
|