Phylogenetic profile : SigD

Orthologous information of transcription factor. (Explanation of these marks.)
TF COG Orthologs
SigD COG1191 +++...++.....++.+++++.++.....++++.......+++.++++..

Orthologous information of regulated genes. (Explanation of these marks.)
Regulated operon Regulated gene Orthologs
cheV cheV **+....+.....*+.+++**.**+++..*+++++***....++**.+.+
**+....+........+++**.**..+..*+++++.**....++**.+..
degR degR No ortholog data.
dltABCDE dltA *..+*+++....+++++++++.++.....+..++.++........*....
epr epr **+.++..+..++*++....+.++..++++..+++.+.......+++.+*
fla-che flgB *++....+........+++++++*.....+++++++++....++..++..
hag hag ***....+........****+.+*.....++*+++**+....++..*+..
hemAT hemAT No ortholog data.
lytABC lytA No ortholog data.
lytD lytD *.+..++...........................................
lytF lytF No ortholog data.
tlpA-mcpA mcpA ***....*........*****.**..+..*++*++.+*....++*+.+.+
mcpB mcpB ***....*........*****.**..+..*++*++.+*....++*+.+.+
mcpC mcpC ***....*........*****.**..+..*++*++.+*....++*+.+.+
motAB motA *+*....+........+++++.+*.....++++++++*....++..*+..
nfrA-ywcH nfrA No ortholog data.
yqxD-dnaG-sigA sigA ++++++++++++++++++++++++++++++++++++++++++++++++++
tlpA-mcpA tlpA ***....*........*****.**..+..*++*++.+*....++*+.+.+
tlpB tlpB ***....*........*****.**..+..*++*++.+*....++*+.+.+
tlpC tlpC ***....*........*****.**..+..*++*++.+*....++*+.+.+
ybdO ybdO No ortholog data.
yfmTS yfmT **++*+++...++**+*++**.++.+.+++++++++++.+....+*+.++
yjbJ yjbJ *+++++.+........+++++++++++***+++++++++*..++++++..
yjcPQ yjcP No ortholog data.
yjfB yjfB No ortholog data.
ylqB ylqB No ortholog data.
yoaH yoaH ***....*........*****.**..+..*++*++.+*....++*+.+.+
yscB yscB No ortholog data.
yvyC-fliDST yvyC **+...................++......**+.............*+..
comFABC-yvyF-flgM-yvyG-flgKL yvyF No ortholog data.
yxkC yxkC No ortholog data.




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai