Content of DBTBS release 5

Transcription Factors Regulated Operons Predictions
Sigma factors
Helix turn helix family
Other family
No family assigned
Cell envelope and cellular processes
Intermediary metabolism
Information pathways
Other functions
Category not assigned
Predicted conserved hexameric motifs

Predicted terminators
M.J.L. de Hoon et al.,PLoS 2005

Predicted operons
M.J.L. de Hoon et al.,PSB 2004

Predicted Regulons
Terai et al.,Genome Biol. 2001

Please cite the following reference when you publish your research results using this database:

Sierro N., Makita Y., de Hoon M.J.L. and Nakai K.
DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic Acids Res. 2008, 36 (Database issue):D93-D96; doi:10.1093/nar/gkm910 (NAR online).
Data volume
We updated our flat file (dbtbs.xml) on 21th Oct 2008. Please let us know if you need the newest version.


Yuko Makita ...Maebashi Institute of Technology
Michiel JL de Hoon ...RIKEN
Nicolas Sierro ...Human Genome Center, IMS, University of Tokyo
Naotake Ogasawara ...Nara Institute of Science and Technology
Kenta Nakai ...Human Genome Center, IMS, University of Tokyo
Link to contributors(for old version)  
Link to the previous version
Contact information
Version History

Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai
Access Countsince January 25, 2003