Similar regions between promoters of cad
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AGTTCTTCACGATCCGCCCCTTTTTCATATGCAAGCTCAACCTGCTGGAAAAATGCAATC hal ................................AAGCTAAGCCTCCTTGAATGAT...... -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< <<<< sub ACATCCACTGCTTCTTCGGTTGTCCAATCTTCATTCATCGGATATTGATAC-----TCCA hal ...........................TATTCATTCCTCCACTAGGCATACGGGCTTGAA -240 -230 -220 -210 -200 -190 < sub TTTTCTTCACTCCTTGTAGATTTACTTCCCTTAAGAGAAAGCATCTTCATTTGATCATAA hal TTTGTTATACTCATTCTTGTTTT...................................AA -180 -170 -160 -150 -140 -130 sub ATTGTTCTTTACATTCTTTCAAGTTCATAATATAATTCATTTGTTTTACGTCTAAAAAAC hal TTTGTTATACTCATTCTT.CAAGCTCAGAATA...........TTTTACCACATAAAAAG -120 -110 -100 -90 -80 -70 sub GGTTGAGAAACTGATTTTAATACACACTATTATGCATAGGTATGATTACAAAGGTGGGAA hal TTTTCCTAGAGTCTTATTCATTC-CTCCACTAGGCATACG.................... -60 -50 -40 -30 -20 -10 sub AACAA hal ..... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...