Similar regions between promoters of fhuD
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CATAGACCTGCGATAAGGACGATGACCGCGCCATATGTCCTTGACGTCCATTGGATTTCT hal ............................................................ -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TCTGATGCAGTCCGTATATTTTTATGTTGACTCAACTGCCGTACTTCCTTTCTGTTACTG hal ...............AAACTTTTATGTTGACT.....................GATATTG -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub ATAATGATTATCAATTGCTGTTTCAGTATATCACTTTTTTCAGCTGATTTAATAGAGTG- hal ATAATCATTTTCATTT..............TGACTTTCTTCATCCGTTTTTTTATAGTAA -180 -170 -160 -150 -140 -130 <<<<<<<<<<<<<<<<<<<<<<<< sub ---TTTTGAACAAAAATGAAAATGCATTTGCAAAAATATCGTGTCAACCGGCACTTGCAG hal AGATTGTGAACGATATTGATAAT-CATTTTCATTTATA...................... -120 -110 -100 -90 -80 -70 sub TGGTATAATCACAGATGATAATGATTCTCTTTTTCATCTATCTTTTAGAAAGAAGGTATG hal ..............ACGATATTGATAATCATTTTCATTTAT................... -60 -50 -40 -30 -20 -10 sub AGAT hal .... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...