Similar regions between promoters of fnr
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GATTGTGTCTGCCATGGGCGGTTTAGGCGGCTTTTTTCCTCCGCTCATATTGGCGAGTGT hal ......GTATGCCATCGG--GTTTATG..........CCTCCGCTCATTTTAGCGATGGT -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub ATTTCAGGCAACAGGCCAGTACGCGATCGGGTTTATGGCGCTTTCAGAGGTGGCGTTAGC hal GTATCAAGCAACAGGACAGTATGCCATCGGGTTTATGGCCCTCTCAGAAGTGGCCCTTGC -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CAGTTTTGTCCTTGTCATATGGATGTATTGGCAGGAAAGAATGAAAACACACACGGAGAG hal TAGCTTTGTCCTTGTCGTCTGGATGTACTTTCAAGACTTACGAAACACGGGCAACGTTTT -180 -170 -160 -150 -140 -130 >>>>>>>>>>>>>>>>>>>>>> sub AAACAGCCAGAGCATCAACTAACACTGGGGCATTCACAAGATTGTTAGTTTTTTCTCGAT hal AAACA.........................CGTTCACCGGATTGTTCGTTTTACCAAGCC -120 -110 -100 -90 -80 -70 sub G---GGTACAAATCAATTCACGTTACAATAAACACACA---ACGTGACTTTCTTCGAGGT hal CCAAGCCGCAATTTAA---ACGATAAAATAAAATTACTTCCACATGATTTTTTTAAAGGG -60 -50 -40 -30 -20 -10 sub GAGCTC hal GTG... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...