Similar regions between promoters of guaB

<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< <<<<<<<<<<<<<<<<<<< sub TGCGGCTTGTTTATAAAACGATTCGGCATGCTTTAAGAAA-TAAATAAACCGTTCACTGT hal .........TTCAAGAAACAATTTCCCATG-TTGAAGATGGTACATAAA........... -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TTTTAAAAGAGTTTTTTTTCGCATCGTTAATACCGTTTAAGATATAAACCTTTTCTAGAA hal ................TTTCTTGTTGTTCATATCGTTCAA-AGAGATACTTTCTC..... -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< <<<<<<<<<< sub ATTTCTGGGTTGATTCAACGGAGTAAAATAGCGCTAAGTCTTTCCACTC-ATGATATGTC hal ........................AAAAACGGGAGAAGTTTTTCCCAGCGATGTTCAGTC -180 -170 -160 -150 -140 -130 << sub ATGTATATTTCTTAATCCTTTCCGTTATCTAAATATT------TCAACTCTTTCCCGCTT hal AAAAAAATACCT----CCTTTCCCTGATTAAAATTTTGAAAAATCGAACATTTACCCGTT -120 -110 -100 -90 -80 -70 sub CCTTGACATGCTCTTGGCTAGTTGATAATCTACATATAATATTTTGCCGAAAAGAGGGGG hal TCTTGACAGTAGTTTGCCCACTTGATAAGCTACTAATAATATTTTTAGGAAAATCTGCGG -60 -50 -40 -30 -20 -10 sub ATTTACTA hal A....... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...