Similar regions between promoters of pssA
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub ATTCAGGCTGAAATCGTAAAGAACGCCGGACATCTGTTATCTCTGGAGCAGCCAGAGTAC hal ............................................................ -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GTCAATCAACGCGTCTTGTCCTTTTTATGCGGGGGGATAAAATAGTAAGGAACATGAAAA hal .....................TTTTTCTGAGGGGAG........................ -240 -230 -220 -210 -200 -190 sub GATTGGCATTCATTTTTCAAAAGGTAACAAATGTTGTATAATAAT------AGAATTTGA hal .......................GTTAGTAATGTGCTATTAAAATCTTTTAAGAAGAGGA -180 -170 -160 -150 -140 -130 sub ATGCTGCTTTTTTTGGGAGCATTCTATGTTATCATGCTTATTGGAGAAAAATTTTTCCTG hal ATTTACATTTTTTTCTGAG...........................AAAAAATGTTTTTC -120 -110 -100 -90 -80 -70 sub TAACGCTATTCGATCACTATCGTCAAATAATATAGATGGTTTTACAATTGGAGGTTTGGT hal TCACGACGTTCTTTCAC...........AATTTACATTTTTTTCTGAGGGGAGG...... -60 -50 -40 -30 -20 -10 sub TACACT hal ...... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...