Similar regions between promoters of purA
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub AGAACCCGTACTGGAGCAATGGGGGCGTGACGATAGAGGACCCGGACGGCTGGCGGATCG hal ............................................................ -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TTTTTATGAATTCAAAAGGGATATCAGGCAAGTGATTCTTTCTTATGCTAAAGGATGAAA hal TTTTTATGTAATATAAAG.......................................... -240 -230 -220 -210 -200 -190 sub GTTTCGCAAGCTTTTTATGACAAAGCAGTGAGAAAACGCTTATAAAACGAATGGAAGCGA hal ..............................................ACGATATGAACCGA -180 -170 -160 -150 -140 -130 sub ACGAATATAGATTTACAATAAATTAATGTTCGGATTTACAATTGACTTTCTGTTTCTTCA hal ACAAATTCAGGGCAATATCTTACAAATGTTCGGATTTG--ATTGACGTTTGTTGCCTAAA -120 -110 -100 -90 -80 -70 sub CTGATAAACT---TGATT-TGTTTGAATA--GAATCGTTTTGAAAGGTTAA--CGGAGGT hal TTGATATACTGTTTGAGGATTTTTGATTAATGACTCGGATTGTACGCCCGAGACGGAGGT -60 -50 -40 -30 -20 -10 sub GCACGGAC hal GGACG... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...