Similar regions between promoters of tgl

<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub ATTTCCTGATCCAGCTTTCCGCTGGCGCTTCGGTAAGAGCTAAATTCTAATATAAGAATA hal ......TGGACCATCTTTCCG.....................ATTGCTCATATAAATTTA -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub GGGATAATGAGAATCGCAATAAATGAGACGATTAATTTCTTTGAAATAGACGGTTTCTTC hal GATAAAACTCTAAAG--AATAAATGA.........TTTCTTTCATTTTAAAGGTT..... -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<< sub AGCCAATTGATAAAAGTCTTCATGTCACTTGCTCCTTCAGGTTTGATACAGTATATATCG hal ......TAGATAAAACTCT......................................... -180 -170 -160 -150 -140 -130 sub GCTGCTTAAAAAAGTTTTAAAATAAAAAATGGAAGAAGTTCTTTTTGGCTGTCTT-CTGC hal ..TGCTCATATAAATTT--AGATAAAACTCTAAAGAA..TCCTCATGGTGGTCTTTCTTT -120 -110 -100 -90 -80 -70 sub CTTTTTAACTTTCATTGCCCAAGCTCTTTGCATATCTTATAAAAAACAAGGGGGGCTAAA hal CATTTTAA.................................................... -60 -50 -40 -30 -20 -10 sub C hal . -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...