Similar regions between promoters of yclN

sub TCTTTCTCAGGAGAACATTTGTATTTTTCACGAGGAATAATGTTAGGTTTGCTGACCGTA hal .............ATCATTTTCACTGATAATGATTATCACTTTTAGGTGT.........A -300 -290 -280 -270 -260 -250 sub TGCCTGCGTTATAAAGATAAATATGGTAAACAGCCTAACGTTTTGGGATGGAAAATGGTT hal TGCATGTTTGTTGACAAAATAAATGATAAT--GCTTATCATTTT--CACTGATAATGATT -240 -230 -220 -210 -200 -190 sub AGAATGATTAGTAAAATTGATAAATGACTAGGTTAATATTTTTAAAGAATATTGACTAAC hal ATCACTTTTAG......................................TGTTGACAAAA -180 -170 -160 -150 -140 -130 sub CCTATAAAAATGGTAATA--TGTAAATGATAATGATAATCAATTACTATATGGCCATATT hal TAAATGATAATGCTTATCATTTTCACTGATAATGATTATCACTT................ -120 -110 -100 -90 -80 -70 sub GTTTTGAGTCCTTGCGGAGTAGGAGATACGTTCTTTTTGCTGTAAGGATGTAAGGAGGCA hal ............................................................ -60 -50 -40 -30 -20 -10 sub GC hal .. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...