Similar regions between promoters of ydiL
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub GCAGTTTTTTCTTCAGATTCTACGAGTTCAATGACAACGCGATCACCTAATGGCTTTAAC hal ............................................................ -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AATGAAATAACCTCCTCAATAGTATGAATATGTAATTTTAGCACTCAGCACTAAAGAGTG hal ...................................TGTTAGCACTCTCTTCAAACGAGTG -240 -230 -220 -210 -200 -190 sub CTAACACAATTCTTATAATAA--AGAATCTCCCTTCCAATTTCAAGTGATAAGATAAAAA hal CTAACACAGTTACAATGATAATCAGAACCTGCTT.......................ATA -180 -170 -160 -150 -140 -130 sub ATTTTTCACGCTTACATCATTCTTTTCCGCTCCCTTTTCCGTTAGCTTTTTCACCCCCGT hal ATTCTTCA---TCCCATCTGGCATTCCTTCTGCTTTTTCCG.....TTTTGCAAGCCCTT -120 -110 -100 -90 -80 -70 sub -ACCGATTATGTTACAATAGCTGTAGATGAACGAAACCCACTTAACAAAGGAGTACATAC hal CACAAATTTTTTTACAAAA......................................... -60 -50 -40 -30 -20 -10 sub CAT hal ... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...