Similar regions between promoters of yeaB

sub ATACCAGCTTATTTCAAATTTGTAGTGTTTTGTTTGCGCTTTCAGCGAATGTGTGGAAAA ste .......................................................GAAAA -300 -290 -280 -270 -260 -250 sub AATGTTTCGTTTTTTATTCGCTGTGTGATTTTGCGTAATATTTACAATTCGATAGAATGC ste AATCCTCCCGATTTTCGTCG........................................ -240 -230 -220 -210 -200 -190 sub GAGAAGCACTGGTGTCCTTGGGTTTGATGGGATTTTTGG----CGGAGCAAATAAATTGG ste ..............TCCTTGTGTGTCAAGGATTCATTCGACATCGGAATGAAAAAAT... -180 -170 -160 -150 -140 -130 sub ATGAGAGAAAAAGTGTTCCTTCGTCACTATTTTTCTGTGGCGGGTGAATCATGTTTCTGT ste ATGAGAGAAAAACT................................AATTTTCTTGCTGT -120 -110 -100 -90 -80 -70 sub AGACCCACTGCGGATCAGCTTTGTAAGATAATAATAGGAA-AATGTGAGCGAGAGGAGGT ste AGACCCAACCGGCTTCAAGCTGGTACACTGATACGTGCAAGAATGAGATGGCTAGG.... -60 -50 -40 -30 -20 -10 sub TTTGT ste ..... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...