Similar regions between promoters of yesO
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TGAAAATAAGGAGGGACGTGAGCGTTTCAGAAATTGCTGAAGAAATCGGGTTTGGCGATA hal ..AAAATAAGGGTGGCATTCAGCGT................................... -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub ATCCGAAGTATTTCAGTCTTGTTTTTAAAAAATATACCGGTCTGACACCGTCAGAATTCA hal ..........TTTCTGTAATTTTTTTAACA.............................A -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GAAGAAAACAGGGAGGCGCTTCCGCAGGATAGCCATCTCTGTTTTTTTGACTTTCGCCAC hal TAAGAAAAGTGCTAGATGCGTCATTAAGAT.........TATTTCTTTGTTTTCTGTAAT -180 -170 -160 -150 -140 -130 sub TGTTTTTTGAGTGTTTCGC------CCTATCCGAACGCTTT--AAAATAA-AATGTAAGC hal TTTTTTAACATTTGTTAGCTACAAGCAGAGCAGAATCCTTTCTATAATAATAATGTAAGC -120 -110 -100 -90 -80 -70 sub ACTTACATTAAAGGGGGGATTGGTTTGAAGAAGATTTGTTACGTGCTGTTATCCCTTGTC hal ACTTTCAAAAAAGAGGGGGATG...................................... -60 -50 -40 -30 -20 -10 sub TGCGTCTTT hal ......... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...