Similar regions between promoters of yfhC
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GAAGACCCCGTGACCGGCACAGCATCCGGCGTGATGGGGGCTTATATGAAACATTATGGC hal ............................................................ -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub AATGCCGAGCAGCATAAATTTATCATTGAACAAGGGCAGGAAATTGGAAAAGACGGAAAA hal ......................TCAGGAAACAGAGGAATAGAAATGGAAAA.AGGAAACA -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GTGGAGATCGAAATGAACGAAGCCGGCGGCCATGTGAAAGTGAACATGACAGGAACAGCC hal GAGGA-ATAGAAATGGA..............ATTTGAAAATGATTATCA........... -180 -170 -160 -150 -140 -130 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GTTTACTCAGAAACCCGTATTCTTAAAATCTAATACGGATGATGGTTTACAAAAAGATGC hal ......TCAGGAAACAGAGGAATAGAAATGGAAAACGGTTGGAGAGAGAGAAAA...... -120 -110 -100 -90 -80 -70 sub ACTTTCCGTTATCATTATGAAATGATAATCATTTTCAATTGCATAGGAAGGTGAGACGGT hal .............ATTTGAAAATGATTATCATTATTAAT.GAATAGAAATGGAAAACGGT -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...