Similar regions between promoters of ykuF
<<<<<<<<<<<<<<<<<<<<<<< <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TGCGGGATGAGAGAGCTTTTTAT-TGTGTGTTCGGTTGTCTCGATCATATGCGGCTCGAG hal ........GAGGCAGCTTCCAATATCTGATTTCGTTTGTTT................... -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub ATACCTGGCATAGCCATATCCCCCGCCGGCCGTTAAAGCCCCGGCAGCAAGAGCGCCGAA hal .........................................................GAA -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CATTCCTTTTAGAAATTGTCTTCTGGACATCTTTTTCATTTCAAACCAACCTTTAATAGA hal TATTCATTCAAAACATTG............CTTTTTCATT.................... -180 -170 -160 -150 -140 -130 sub GTTTTTCTATTATATCATCTGTATCTGATAAAAATCTCATATGAGCATGTGCTGACAGAG hal ...TTTGTTTTTAACCATCTTTAT.................................... -120 -110 -100 -90 -80 -70 sub GCAGGGATATAATGATAGAATAT-TATTGAATGAATAATCATTCACAA--TTGGAGGGAT hal ................AGAATAGATTTTGAATGAATATTCATTCAAAACATTGGAGGGA. -60 -50 -40 -30 -20 -10 sub AAAC hal .... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...