Similar regions between promoters of ykwB
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CAATATTTTGTTCAAGTGACTGCGTCACGTTTTGAGTTGTATTTTTCCCATCCTCTGTAA ste .AGTATGTCGAGCAAAAAACCTCCGGCCGCTGTTAGTTGT.TTTTTCGAGTTTTCCGTTA -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TCATCGGTTTTAGCGTCAAATAAGAAGACAGCATTAAGAGAACAACTGTGATGATTAACA ste TGAT.........................................CCGTTATGATGAAGG -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TAATCGAAACAAAAACAGCAATCTTCATGTGAAGTTTTTTAAACAAACCAATCCCCTCCT ste TAA..........AACAGCAA....................................... -180 -170 -160 -150 -140 -130 sub AATTTCTATATCGGCCCTTTCGTTTGAAAAATGAATAATCAAAAAATAAATTATAAGAAA ste ..............CCCTTTCG...................................... -120 -110 -100 -90 -80 -70 sub ATCGGAATATATTTACTGAAAATTCAATCTTCGTTATAATGAAACAACATAAGGAGAGTG ste ..............ACGGCAAATTCA.TTTCCGTTATGATGAA................. -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...