Similar regions between promoters of ypbB
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CATGTATCTTTGTCTACGATTGTGTACTTTGCCATGAATAAAACCTCCCAGATTGTTCTT hal .............CAACAATTGTGTATTTAGGCAC-AAGAACCCCTCC............ -300 -290 -280 -270 -260 -250 sub GGTGGAACAAATGGATCAATCTTTATATTTAATCAATTTAACACCTATTCCTCTTACTTA hal .....AAGAAATGGATGTTTATATATTTTTAACGGTCAGCTCGTTCGTTCCAGTAACT-A -240 -230 -220 -210 -200 -190 sub TTGTAATGATGTTGCTGCCACATTTCAACAGAAAAATGATTGAGAATGCTTATCACATAA hal TTGTATCGGTGATGACGACAGTTTTCAACCG--------TTAAG--TTTTTTTCGTATAA -180 -170 -160 -150 -140 -130 sub GGGGTTATCTACATAACATCCCCCTTAATGATGA-CTTTAAACGTCGATTTCTGTTTGAA hal CGGTTTGTCT--TTAACTTGTCCAGAGAGAGTGAGCATTACCCCTCTTTTTCAGAGCATT -120 -110 -100 -90 -80 -70 sub ATCTGTTAAAATAAA--AAGAGCAAATCAACGATTTTTGTCAGGAAGAATGTAGGTGGAT hal GTCTGTTAAAATAAACGAAGAGC..................................... -60 -50 -40 -30 -20 -10 sub AGG hal ... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...