Similar regions between promoters of yqgU
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CTGAGGAATCTGCTGCCGTCATAAAGGAGTTTGAGGAGTTAAGCGGGAACATTTATAAGG hal ...................................................TTGATCATC -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GAGTAAGGGATATAGACAGCTATGCTGGATTTCGTGATTGGTTTATTCACCATTATTTTA hal GAGTAACGGATATA...................................CCAGTTTTGTA -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub AGGAAGGGTATACGGTGGAACTTGGAAAAGGCCAAAATCCTTTGCCGTTTCAGCAGTTTT hal AGGAAG.............................................AGCACGTTT -180 -170 -160 -150 -140 -130 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CACACATATATAACGCCACAAGCGGTATCTTGTGGAGGGCGTTATTTTTTCATGAGTAAC hal CACTAACAGTTAA.......................................TCAGAATC -120 -110 -100 -90 -80 -70 sub TGAAACTTTTTCTTTTTTCTGCCGAAGCAAATATGAGAGAATAAAGATGATCGGAGGGGA hal TGAAACTTTTT................................................. -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...