Similar regions between promoters of yqgY
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AAGCCAATGTTTTGTTTTTCGGCATGACGTGCAGCTTGGATATGAGTAAAAAGTTAATTG hal ........................TGATGTGAAGGAGGGAGACGA............... -300 -290 -280 -270 -260 -250 <<<<<<<<< sub TTGTTCCATTCGTTTTTTCCTCCTCAGTTAACCATCTCTTTGTAGAATAACTACCCGGAT hal .....CCATT-GTCTTATCATGCTTTTGGAAGCATCCCTGTG.................. -240 -230 -220 -210 -200 -190 sub CATTTTTCATTTAAACCATTTACAGAACTTTTTTCGGATTATTTTTTAAAAAACATTCAT hal ...TTTACATTTGATCCTTGT.....ACCATTGTCTTATCATGCTTTTGGAAGCATCCCT -180 -170 -160 -150 -140 -130 sub ACAATAGAAAACACAATCAAAGGGACAAATTCCATTTGTATATTAATAATGAAAATG--- hal ............ACAAGGAAAGTGGCAT-TTACATTTG..TTTTGACAAGGAAAGTGGCA -120 -110 -100 -90 -80 -70 sub TTTACATTTCTAGGTGTGATCTATTATAATAACAGTCAGAGGGACTCTCGGGAGGGGATA hal TTTACATTTGATCCTTGTTTCCGATATAATA............................. -60 -50 -40 -30 -20 -10 sub AAA hal ... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...