Similar regions between promoters of yqkL
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TTGCGTTTTCTTTAAAGTTAATCAGACAGCTGTTCGTGAAACGAAGCCTGCATGACGCGC hal ...CTTTTTGTTTAAAGATGATCCGTAATCAGTTTGTAAAGGGGA---TTAACGAACCGT -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CGATTCAATGGTTCGGGCGGTATGCCTTTGTGCTGCTGGTCATTCTGTTTTTAGCGCTGA hal TTTTTCCACAGTTTTTACAATATTCAATGCTCATCTTATGCGTTGGAGCAAGCTCGCTCA -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TTTCATCTCTCTTTGAAGCATACTTATCTCCTGTTTTAATGGAAAAGCTTACATCTAGAC hal TCGCTTCAGGAATCGAGGCGTATATGTCACCTTTATTAATGAGAATGGT--CATCGGCTC -180 -170 -160 -150 -140 -130 >>>>>>>> sub TTTTTTAAAATCATTATTAAAAGAAAACCATTTTAT-TTATCAGTTTATAATAATTAT-A hal TATTTTATAACAAATATTAACTAATAATAATTATCTGTTACTAAATAATAATCATTATTA -120 -110 -100 -90 -80 -70 sub GTTGGAACTCTGCGCGTATTTTGTTATAAT-GAGTCATGGAATGCGGCGTAGGAGGGAAA hal ATTGACACCTTTTTTCGACAGCCTTATAATTGAGAAGAGGCATTAGTTGAAGGAGGG... -60 -50 -40 -30 -20 -10 sub GAC hal ... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...