Similar regions between promoters of yrkH
sub TGCTGATGTATCCTTAACGTTTTAGTCCCGCTAAAAGATTTGATATAGGAGGTATTGAAA ste ..................................................GGCATTGAAC -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CATGACCGTAAAGGCAATGACCCCAAAAGAAGTGACAAAAAAATCTTTAACAAAGAACCT ste CAT....................CAAAGAGATCGCCAATAAGATCATTCGCGGCGAGGAG -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TTATTTATTTTGGATGTGCGTAATGAAAATGATTTTAGTGATTGGAAGATAGAAGGGCAT ste CTGTTCATTGTGGACGCTCGCAACCCCGAAGATTTTGCCGATTGGCGGATTGAAGGGAGA -180 -170 -160 -150 -140 -130 sub GACTTTGACCATTTGAATGTTCCTTATTTTGATCTTTTAGATGGCGTAGAAGATATCTTG ste CATGTCGAGGTCGTCAATATTCCGTATTTTGAAGTGTTGGATGGCATTGAACCATATTTG -120 -110 -100 -90 -80 -70 sub GAGAAAATTCCTTCTGATAAAG---AAGTGCTG---GTCGTTTGCGCAAAAGAAGGTTCA ste GACCGTTTGCCAAAAGATAAAAGCAAAACGATTTATGCCGTTTGCGCGAAGGGCGGCTCG -60 -50 -40 -30 -20 -10 sub TCCGTC ste TCGG.. -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...