Similar regions between promoters of ytzA
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TGATATGATTGCATCCCTTGAAAAAGCGTCTGCTCTTATTACAGAAGAAGGCGGTTTGAC hal .GATATGATGCCAGCCTTTGAAAAAGCAGCCGCCGTCATTACCGAAGAAGGTGGGATTAC -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TAGCCATGCTGCGGTAGTCGGATTAAGCCTTGGCATCCCGGTTATCGTGGGTCTGGAAAA hal ATCCCATGCCGCAGTTGTTGGTCTAAGTCTTAATACACCTGTGATCGTCGGTGTACAAAA -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TGCGACATCTATTTTGACAGATGGCCAGGATATTACAGTTGACGCTTCCAGAGGCGCAGT hal TGCGTCTGCGCTCTTTAAAGATGGGGAAGAAATAACGGTCGATACGAGCCGCGGTGACAT -180 -170 -160 -150 -140 -130 >>>>>>>>>>>>>>>>>>>>>>>>>>>> ]]]]]]]]]] ]]]]]]] sub CTATCAAGGCCGTGCGAGCGTTCTTTAATTACAGGTGAAAATGGAAGGGGAA-TCCCTTC hal TTACAGAGGGCAAGCAAGTGTACTATAA-------TGAAAAGAGAAGGGAAAATCCCTTC -120 -110 -100 -90 -80 -70 ] sub CTTTTCTCTTTATCATGCCTTTTGTTGAACAGAACGTGTTACACGTGTGGGGGGCTTGGA hal TCTTTTTCTCTATGAT............................................ -60 -50 -40 -30 -20 -10 sub T hal . -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...