Similar regions between promoters of yunH
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AAAGTCTACGATATCCGGAGCGTCCATCATATTGACATGCTGAACCTCTCTTTCCCCTCC hal ..........................TTATCTTAACATGCTCA................. -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TGCTTTTCCAGCGATTAAATTGGCGTTTTCAAAAGCCGGTATTTTCATCACATCAAGAAT hal ............................................................ -240 -230 -220 -210 -200 -190 <<<<<< sub ATTCATAGCGCATTCTCCTTTTCTATAAAAACATTGGTTAAGGTGAATAATTTTCAATAG hal ...................TTTGTCTCATAACAAACGTTGAGATGAAAAAGTTT....AG -180 -170 -160 -150 -140 -130 sub GAATTCTAGCGGTTTTGCTGATGT-AATACGATCATAGTAGCAGTAAACTGTTGAAAATA hal AAAATATAAAACTTTTGCTTATCTTAACATGCTCAGA................GAAAATA -120 -110 -100 -90 -80 -70 sub GAACTGGTTGTGTTACATAAACTGACATGGAAAATCGTCATCCTGACATGGGGGGATCAA hal TAAAACTTTTGCTTATCTTAACATGCTCAGAAAAC--TTATGAATGCAGGAGCGAATCAA -60 -50 -40 -30 -20 -10 sub T hal T -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...