Similar regions between promoters of ywpH
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GCATGGAGCAGTATAAAATCAAGCTGTCAATGCCGGAAAAAAAATTGAGCTTTCAGTGGT ste ..............AAAATCGCGATTTTACGACCCAAAACGAAATT..........TGTT -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>> sub TTGCGTGGGATGGCTCTTCCTATGTGCGCATGAATACGCAAAACTGGC----TGACAAAG ste TTCCGCCGGATGGC.........GTGCACAAAAAAATGCAAAAATCGCGATTTTACGACC -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CAAATCTTTTTCCGTTTTTTAAAAAGTACATATTTCTTCAAAGGAAAAAAGCAAAAGATG ste CAAAACGAAATTCGTTATCATAAAGGTGC..............GAAAAACGATCTGCATG -180 -170 -160 -150 -140 -130 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TTTTTAGCTGAAGGAAAAATGAAAACGAAAGATAAAAACAGAGGCTGAAAGCCATTTTTA ste TTTTCCGCCGGATGGCAAA.........AAGATTATAGCACAGGCGGA............ -120 -110 -100 -90 -80 -70 sub AGCGTTTTTCTTTTCTTGTTGCATCATTTACAATACATACAACCGCAAGGAGAGGAGGAA ste ............................................................ -60 -50 -40 -30 -20 -10 sub TCGC ste .... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...