Similar regions between promoters of ftsE
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GCCAAAGGGGCTTGTAGATGATAACGAAGCCGCTGTTATTGCCAAATGGCTGTCAGAAAA hal ...............................................GGGTTTCAGAATG ste ......................................TGGCGGAATGGCTGGCTGCGAA -300 -290 -280 -270 -260 -250 >>>>>>> ]]]]]]]]]]]]]]]]]]]]]]]]]]] sub AAAGTAAGATAAAAACATCCTTGCCGAGTGCTGGCAAGGATGTTTTTATGCCTTGACAAT hal GTAGTAGAATATGACAAGCTTTG.............AGAATGGTAGTAGAATATGACAAG ste AAAATAA...................................TTGTTCCCCATTTGAAAT -240 -230 -220 -210 -200 -190 sub ATGAATGAAAAGAAACTGTAATAGTATTATGTCTAAATTTGACGT-ATAATGAAGTGTAT hal CTT--TGAAATTAAATTGTAATATCACCGT-TAAACAATTGATGTTATAATATGTTGGGT ste ATAAATGTAAA.........................ATTTGAAAT-ATAA.......... -180 -170 -160 -150 -140 -130 sub TGAAAAAGGGAACTTTCAGATTTTTCATCTTTTTACAAATGAATGGGTCATAAATTGTCG hal GGAACAACCGA..................TTTTTACATATCAA................G ste .............TTTCTGTTTTTGCATCTTTT........................... -120 -110 -100 -90 -80 -70 sub AATGCATTCGAAGAGTATGACCGTGTGATAGATAAAATGATATAAAAGATTAGGTGATTT hal ATTGAATTTGATTAATATGA................ATGTTATAATATGTTGGGTG.... ste .ATTCATTCGAA................................................ -60 -50 -40 -30 -20 -10 sub C hal . ste . -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...