Similar regions between promoters of hisS
sub GTAGGTCAGATTGCATGATTAGAGAGGA-ACCCGCCCCAGGCTGAAAGCGGATCCCATTG hal ..........TCGCAAGATCAAAAAGGATACCCG.......................... ste .............CATGGCCAGAGAGGA-AAC-GCCTAAGGCTGCGAGCGTTTCTCCATG -300 -290 -280 -270 -260 -250 sub CGTCTTTCTCGAAACAACACTCCGGAGGTTTCCTGCTGAACGCGTGAATAACGCCATTAG hal ..........GAATGAACACCTTTGAGGAGTCTTTCTGAACGC---AAT--CGTTAGTAG ste ATGGCTTAACGAAAGA-CACTCCGTAGGTTTCCTTTTGAACGCGCT--TTGCGCCAGTAA -240 -230 -220 -210 -200 -190 sub GCAGTGAACGTGAACC-TGCGTTAAAGGA--T-CGAGCGGGAATATG----AACGTATTC hal G-AGAGAACGTAGGCA-GGCGTTATCTGCATT-TGAGTGGAAGCATGTCATATCATGCTT ste AAAG-GAACGCGCGTCATGCGTTAATGGC--GACAAGCGGAAGCCGG----ATCGGCTTC -180 -170 -160 -150 -140 -130 sub CAACTAGGGTGGCACCACGGGTAT-AAC--TCTCGTCCCTACTATCATGTATAGTAGGGG hal CAATTAGGGTGGCACCACGGGAATCAAC--TCTCGTCCCTGATGGATAATACATCAGGGG ste -AATTAGGGTGGCACCGCGGGAAT-AACGCTCTCGTCCCTA................... -120 -110 -100 -90 -80 sub CGGGAGTTTTTTTCATTTTCATCATTAACGATCATTGGATATTTTATAAGGAATACATAA hal TGGGAGTTTTTT.......................................AATACATCA ste ................TTTCCTTTTGAACGCGCTTTGCGCCAGTAAAAAGGAA....... -70 -60 -50 -40 -30 -20 sub GGAGGTCTACCT hal GGGG........ ste ............ -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...