Similar regions between promoters of lytR
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TTCTTTTGTTTCAATGTTACTGTCTGGCGATACATCTTCACCTTGACTCTTTTGACTATT hal ............................................................ ste ............................................................ -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AACCCCGCAACCCGAAAGAAGCAATATAAAGAACAGTAAAGCAATAAATTTTTTCATTTT hal AACCCCGCAA..........................TAAACTAATAGTTTCTTCCATTTA ste .......................ATAGGAAAAACAAGCTATCAATGAAT........... -240 -230 -220 -210 -200 -190 sub TTTCACCTCATTATATTTTATCGTCAACCTATTTTATATTTTAAAGAAAAATT--AAGAA hal TT.......ATTATATCATATGATCA.................................. ste ............AAATTTTTTTGTCATGGGAGTCTATTATGGTAACAAACATAGGAAAAA -180 -170 -160 -150 -140 -130 sub ACAATGAAACTTTTTTTTATAAAAAACGACTATTTTAGGATTTCATTCTTGTATTAAATA hal ...ATGTGACAATTTTTTA......................................... ste CCTATTAAACATCTATT..................TGGGAGTCTATTATGGTAACAAACA -120 -110 -100 -90 -80 -70 sub GAGTTGTATTTATTGGAAATTTAACTCAT-AATGAAAGTAATTTAACAGACGAGGTGCAA hal ...................TTTTACGCAT-ATAGAGAG...................... ste TAG........ATAGGAAAAACAAGCTATCAATGAATGAGATTTGTCGAACATTGTCGAA -60 -50 -40 -30 -20 -10 sub AGG hal ... ste ATG -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...