Similar regions between promoters of mecA
<<<<<<<<<<<<<<<<<<<<<<<< sub AGAAATCAGATAGTCATGCTCCATGAAGCGGCACCTCGCTTTCAGTCCTTCGCTTGTACT hal .......................................TTTTAGTCCTACACTTCTACT ste .......................................TTCCCTTCTTTCGCTTTTTAT -300 -290 -280 -270 -260 -250 sub ACTACTATATGAG-ACAGG-TCATATTTTATGATATCAGCCGCCTGATCTGCCGTTTTTT hal AATACAATCT..............................................TCTT ste CATAAAATAAAAGTACAAGATCATAAGTTTTGATTTAA.............CCAATTTTT -240 -230 -220 -210 -200 -190 @@@@@@@@@@@@@@ sub AGGCAAAGGTGCATTTTTATTTCTTTTGTGA-CTGTTTT-ATCATAAAATAGAAATACAA hal TGGAAATCGGGTTTTTTCGTTTCCAATCCAAGCCGATTT-ATCATAAAATAGAGGTAACA ste A--AAAATGCGTTTTTTTATTTCCCTTCTTT-CGCTTTTTATCATAAAATAAAAGTACAA -180 -170 -160 -150 -140 -130 @@@@@@@@@@@@@ sub AGGAATTCACACTGGCCTTGGTTAAGGTTAAGATGTGGACGGAATGGGTAAAGTGTAGTA hal A................................................AAATTGGCGTA ste ...........................................................A -120 -110 -100 -90 -80 -70 sub AAGTACAATTAATCGGGAGCTTAGATGTCCCTTCAACATCTTATATAGAAGGGAAGGTTG hal AATAAGAACT.................................TATCGAAGAGTAGGT.. ste AAGTACAAG--ATCATAAGTTTTGATTT..........TCTGTTTTAGAAGGGAGAGTTG -60 -50 -40 -30 -20 -10 sub GCAA hal .... ste AGAA -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...