Similar regions between promoters of minC
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub AAGCGTTTAAAGTGTTGCATACAAACGCATTTGTAGTGATATTGATAGCAGTTCTGGCTG hal ............................................................ ste .............................TTTGTAGAATTATT................. -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TCTGTCTGCTCGAATTTTACGTATTCGGCATTCAGTCTTTGATTCATAAAGACATTATGA hal ............................................................ ste .....CTGCTTGACAGTTATATCTACGGCATCCAGCTGTTGAT................. -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CGTTTAACGGATTTGTGCTTGACCGGTTTATACCGACAATTTTATTAAATATTGCAGCAG hal ...........TTTTTTCAGCATCGTCTTTTGCCAACACTGGCGTTAAATGGGGCGTTTG ste ...............TGCTTGACAGTTATAT............................. -180 -170 -160 -150 -140 -130 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CTCTTATTCTTGTTCTGCCATTTAGATTGTTTTTTATGAGTCTAAAGAAAGAATTGAGAG hal CCATACTAATGGTGCTTCCGATGCGAAAATTGTTACAATATGTCTTGAA--AATGGCGAG ste .............................................AGGAAGAAT----AA -120 -110 -100 -90 -80 -70 >> >>>>>> sub AT---GAGTAAAA--AGGATTTTATCTTTTTTTGACGAAATGAGTATGTTGTTGAGGTGA hal ATTTCGAGAAAAATAAGGAT...ATCGTCTTTTGCCAACA........TCGCTGAGGTGA ste AA---GAGGAAAA--ACG.TTTTCTGTTTTTTGG..............TCGTTGGGGTGA -60 -50 -40 -30 -20 -10 sub ATATT hal ACAT. ste ACGTT -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...