Similar regions between promoters of xylR
sub TTTTATTTCATATAGTAAGTACATCACCTAT---TAGTTTGTTGTTTAAACAAACTAACT hal .................AGTATATCACTTATACTTAGTTTATTCAATAGACAAACTAAGT ste .....................................TTTCTCTTGTAAAAAAAATGAAT -300 -290 -280 -270 -260 -250 sub TATTTTCATCTTATATAACCTCGTCAGTATTTTCAATATTTTTTTTAGTTTTTTATGA-A hal TTTTAT.................TTAGTTTATTCAATAGACAAACTAAGTTTTTATTTTA ste AA.........................................................A -240 -230 -220 -210 -200 -190 sub CACATTAGATTTAATAAAGGGAAGATTCGCTATGTACTATGTTGATACTTAATTTAAAGA hal TCCATTAG-TCTAAGAAA.......................................... ste CACATTCGATCAATCAAATGAAA...................................GA -180 -170 -160 -150 -140 -130 sub TTAAACAAATGGAGTGGATGAAGTGGATAT-CGCTGATCAAACCTTTGTC-----AAAAA hal .....CATATGGATTGGTCGATCTCGGTCC-TTCATATTGTACCTTTTCT-----ACATC ste TCAATCAAATGAAAAGGATGACAGAGACGTGCGGACAGGAAACATTTCTCTTGTAAAAAA -120 -110 -100 -90 -80 sub AGTAAATCAAAAGTTATTATTAAAAGAAATCCT--TAAAAATTCACCTATTTCAAGAGCA hal ATTAAA--AAATGTCATTA-----AGAATCCCTCCTAGAAAGTAAGCGTTATCAA..... ste AATGAATAAACAGCTCGTCTTAAAATTGATTCG--CGACCAGCATCCGATTTCGCGCGC. -70 -60 -50 -40 -30 -20 sub AAATTATCTGAA hal ............ ste ............ -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...