Similar regions between promoters of yclM
sub TTATCATTATCATTTACATATTACCATTTTTATAGGGTTAGTCAATATTCTTTAAAAATA hal .........................AGTTTTAGAATGTT---CTAAAATGTTGAAAAAAA ste .TATGATAAACAATTATAGA................GTTGGCGGAAATTTCTAAAAAAT. -300 -290 -280 -270 -260 -250 sub TTAACCTAGTCATTTATCAATTTTACTAATCATTCTAACCATTTTCCATCCCAAAACGTT hal TT.......................................................... ste ....................................AACCATCATCCGTTC..AAACGTG -240 -230 -220 -210 -200 -190 sub AGGCTGTTTACCATATTTATCTTTATAACGCAGGCATACGGTCAGCAAACCTAACATTAT hal ....................................................AAAAAAAT ste AGGCAG...................................................... -180 -170 -160 -150 -140 -130 sub TCCTCGTGAAAAATACAAATGTTCTCCTGAGAAAGAAATTCCCCCTTGATTTACAGTACT hal TCGTCTTCAAAA....AAAGGTGTTGATGA-ACTGCAAATGTCACTCCATTTGAACGGCA ste ........AAAAAATGAATAGTTCCCATGGGCGGAAAAATGTGATATGATAAACAAT... -120 -110 -100 -90 -80 -70 sub GAAAGAGAGATAATAAATACTAAATTTGTGTGAAAATTTTAAACATTAGGAGATGTAAAC hal GAAAAAGAGA-AATCGATAGGAGAT.......AAAAGAGAAATCGATAGGAGATGGAGA. ste .AATGTGATATGATAAACAATTA..TTGGCGGAAATTTCTAAAAAAT............. -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...