Similar regions between promoters of yfhP
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub GCTGCTCTCGTTCAAACCATGAGATTAAATCATCGCGAAATTGCTGTATGTCTTTTTGTT hal .......................................ATTCATTTATTGTTTCTTTTT ste ........................TTGAATCTTTGTGAAATTGGT....GTTTCCTTTTT -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<< sub TTAATTTGTCTTCAAGTACGTTCATATGTGTTTCTCCCCAGTCTTTCGCGCCCCGCTTTT hal TTATTTTGTACTCTA............................................. ste TGAATCTTTGTGAAATT--GGTCGT-TCCGCCTCTCGCCAACGATTGTCGCCC.....TG -240 -230 -220 -210 -200 -190 sub CTTTAGACTGTTTTTTGTTGTACACTAAGGGCACAGTACGATAATATGTTACATTAAATA hal ........TTTTTTATTTTGTACTCTA...........................TAAATA ste CCTCAAACGGTTATTGGCTGAACACAAGGTGGGGCATAC--TAATA-GTTGCATGAAAAA -180 -170 -160 -150 -140 -130 sub GTAATAAAGAAAAAGCGGAAACATATGAGAACGATTGAATCAGTTTAAAAATTGGGTATA hal -TAATAAAG.......................GATTGACGGAGTTTT----TTTAGTACA ste GAAAGA............................TTGAATCTTTGTGAAATTGG...... -120 -110 -100 -90 -80 -70 sub TGAAAATGGGGAATTTCTTACAAAGTGAATGTGCAGGATCACCCTGCAAGGAGGTCACCT hal TGATAATGGG.................................................. ste ...........................................CTGCAAGAAGG...... -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...