Similar regions between promoters of yfkK
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< <<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CCCTCTAATCCTTTTTTGGCTGCCAGGTCC-CTAAAAATCGCTTCCGCCATCGGAGACCG hal .....TATTGCTTTTTCCACTTCCATTTGGGCCAACAACCGCT................G ste .CATCTAGCCCTTTTT........ATGTAA-CGAAAAAACAACTCCAGCGGGGGAGAGTG -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub -GCAAATGTTACCTAAACAAACAAATAACACGCTTATCATGATGTGCAACCTCCCTATTC hal -ACCAATGGAATCGAATCAAACAA.................................... ste TGCGAATG.......AACGAAAAAACAACTC...................CTCCCCATTC -240 -230 -220 -210 -200 -190 sub TT--TGCCCCTAT--TTCTCTAAAAAGAAACCTTC-ATGAATATCTTAGTAGGATGTTCA hal ............................................................ ste TTCCTGCACCTATGGTACAATACATAGTAACTTGCCATGAA................... -180 -170 -160 -150 -140 -130 sub TTTTCTTTTCAACTGATGTCTTCACTTTTTTGGAATGAACAGCCTGCTTTTAGAATAGGG hal .........CAACCGCTGT-TACACCTTTTACGAA......................... ste .TTTCTTTTCATCT.............................................. -120 -110 -100 -90 -80 -70 sub TTTTTTTCTGATGGAATTCTGTTAGAATAAAACATACCTATATTGCGCATAGAAAGGATG hal ......................TCGAATCAAACAAGCTGTTTTTACGTATAAAA...... ste ......................TGGTACAATACATAG-TAACTTGC-CAT-GAAAGGAGT -60 -50 -40 -30 -20 -10 sub GAACCCT hal ....... ste AAAC... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...