Similar regions between promoters of yheE
>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GTTTGAAGCGAATTCGCGC-CCGGGCCGAAGCATTTTTTCTCATCCAAATTTGCATCATG hal .......GCTATTTCGCGTTCCCTGCCGATGC..TTTTATTCGTACAAA........... ste .......GTGAATACGTTC-CCGGGCC................................. -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TTGATTCTCTTACAAAACGAAGAAGTTTTGAATACGCGTCATATTTATCTGAGAAGGCAA hal TTGATTCT.........................ACACGTGCTATTT.............. ste ............................TGAATACG........................ -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TCACATCTCCGGAAGCATTGTGGCCTTCGTAACCTGTCCGCTTTTTTAATAAAGCGGGCT hal ..................................................AAAAGAGGCT ste ....................................................AGCGGGCT -180 -170 -160 -150 -140 -130 sub TATCTTTATCCAAAGCTGGGACAAACTGCATATTTAGGCCTCTTCAATGATGTTCTGAAA hal TAGCTGT.............................................TTGTGAAA ste TAGC.....CCGAAGGTGGGGCAA.................................... -120 -110 -100 -90 -80 -70 sub CAATGATACAATGAACATAAGCCGTTTTTATTTAGGTCAATTGATACCAAATGTAAGGAG hal CTATG.............AACCCCGTTTTATT..........GATGCCAAACG....... ste ...........................TGATTGGGGTGAAGTCGTAACAA.TCTAAGGAG -60 -50 -40 -30 -20 -10 sub C hal . ste . -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...