Similar regions between promoters of yhgE
>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>> >>>>>>>>>>> sub TGATCCAGAAAATGGAGCGATCCATC-CTGTCTTATATCAAAAGCAA--GATTGAAGACG hal .GTTACAGAATTTGAAGAGAATTATG-CACCGTTAGAGAAAGAGGAATTGATTGA..... ste ..................GATCCTTCTCTTTTTTACAAAAATGACTA--AATGGACAAAT -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GGATCAAAAGCGGCGCAATCAAGCCGTGCGACCCTGAGCTGACAGCCTTTGTGATGCTGA hal ..............................ACCCGCAAGCAACTGCATTTCTCTTGTACA ste TGGTCAATA......................................TTTGTTTGGATGT -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub AGCTTTATATCGCGCTCATTTTTGACTGGGAAAAACAACACCCCCCGCTTGATAAAGAGA hal AATCCTACCTATCGCTCGTTACAGAATTTGAAGAGAATTATGCACCGTTAGAGAAAGAGG ste AAATTTATGT.................................................. -180 -170 -160 -150 -140 -130 >>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CAATTGCGGGACTGCTTGAATTGT-ATGTTGTCAAAGGATTGTCAGCGAACTAGATAATC hal -AATTGATTGACATCTTTAAGCTTCATTTTATGCACGGAATTGCAAAGGACGAG...... ste ...............................TAAAAGGATTGTCTC----CATGATGATC -120 -110 -100 -90 -80 -70 sub CTTTCTCTTTGCAAGAAAATGACCATTTTTTATGATGAGTCAGTTTTAGAATGGAGGCAT hal ............................................................ ste CTTCTCTTTTTTACAAAAATGACTAAATGGACAAATTGGTCAATATT............. -60 -50 -40 -30 -20 -10 sub CAGG hal .... ste .... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...