Similar regions between promoters of ykoG
sub TCCTGTTTTTTTGGTAAAATAAAAAACTGCATATCCTAAGGGAATATGCAGTCATAGATC hal ..............TTACATTAAAACAAACGTATCC-ACGGATCTATTCAGTC....... ste ...TGTTTTTTT......ATAAACAGCTGCCT.................AGTTAAAGATG -300 -290 -280 -270 -260 -250 sub GATTAAGCGCACAAAAAAATACACCATTCGGTCAACCTGCACTTCCCCACGCTGGTATTA hal ................AATTGCACCATTACATTAAAACAAACGTATCCACGGATCTATT. ste TATAAAG..................................................... -240 -230 -220 -210 -200 -190 sub TCCAGATCGGGTCATAAGGGATCAAAGCGCGTTTCTTCCGCGCTTTATCTCAGCCAAAAC hal ............................................................ ste .....................................................CCCTAAC -180 -170 -160 -150 -140 -130 sub AGCACCCCTAGTGCTTTCCGTATACAATTTTTTATTTTAACATCATAATAGATGATAAGA hal ...........................TTCTCAATTGCACCATTACATTAAAACAAACGT ste AGGCGCCCCATTCCTTT..........TTTTTTTCTGGAACAGC................ -120 -110 -100 -90 -80 -70 sub ATCATTTTGTAAACAACGAAATCATTTTTTTCATATAGGGACGGGAGAGGATGGTCAAAT hal ATCATTTTATAAA.AAGGAAAACGTTTTT............................... ste .................GACATTGTTTTTTTC............GAGAGGAGGAGCAACT -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...