Similar regions between promoters of ykrT
sub ACCTGTTACCATGTTCATCAACTGATAAATTAGAATTGTCAA--ACAAGTGAATATATTC hal ...................AACGGATTTGGTTTCATTGTAAA--GGAACTG....TTTTC ste .....................CTGAAAGATAAGAGGCGCGAAGAACGAATGAATCT.... -300 -290 -280 -270 -260 -250 sub TCTTATCGAGAGTTGGGCGAGGGATTTGGCCTTTTGACCCCAAAAGCAACCGACCGTAAT hal TCATAACG-GATTTGG......GATTTAGCCATT.........................T ste ............TTGGCTGAGGGAATTGGCCCAATGAAGCCCA--GCAACCGACCGTAAT -240 -230 -220 -210 -200 -190 sub TCCATTGTGAAATGGGGCGCATTTTTTTCGCGCCGA--GACGC----TGGTCTCTTAAGG hal TTCAATGAGGAGGGGTTCCCATTTTT............................TTAAGG ste GCTATCGTGAGATAGGGCGCACGCCAAGGGCGGCGCCGGAAGCGTCATGCTTCCGCAGGG -180 -170 -160 -150 -140 -130 sub CACGGTGCTAATTCCATT-------CAGATCTGAT-CTGAGAGATAAGAGAGGCGGACAT hal AAAAATGCACTTTCAATT.......................................... ste CACGGTGCTAAGTCCAACAGAAAGACCGATGTCTTTCTGAAAGATAAGAGGCGCGAAGAA -120 -110 -100 -90 -80 ]]]]]]]]]]]]]]]]]]]]]]]]] sub AGA-TG-----TTAAGCCTCCTTCTCTCTGAGAAGGAGGCTTTTTTACGGCCACATATTA hal ....................CTTTTCAATGAGGAGGGG...............CAGAGTA ste CGAATGAATCTTCAAGCCTCTTTCCGTATGCGAAAGAGGCTTTTTCA............. -70 -60 -50 -40 -30 sub ATTAATTACATAATTGGAGGTT hal ATTGATT............... ste ...................... -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...