Similar regions between promoters of ylbQ
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub AAAAGGCGAGGTGCTGTCATTTTCAATAATATTATCCTGAAGTTCTTCAAGCATTGAAAG hal ............................................................ ste ..AAGGGTAAAGGCTGGCTTTT..........................AAGGATTGAA.. -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub CTCCTGAATGCCGTATTCTTTGAATTTCTTGAATTCTTCCAGCGTTTTATAGTTGATAAG hal ......................AAGTTTCGGAACTCTTCAAGTGTTTTGTAATTGACAAG ste ...CCGAATGCAGT...........................................AAG -240 -230 -220 -210 -200 -190 <<<<<<<<<<<<<< <<<<<<< sub CAGACGTTCTACCT----TTGTCAAACAAATC--TCCCCCTTTG-------TTGTTTCTA hal TAAGCGCTTAACTTCAATTTGTTGCATGACTTATTCCTCCTTTGACATAACTTCTCTCCA ste AAGAAGATCT---C----TGCTAAAATAAGGC--TAACGCCATG-------TTG...... -180 -170 -160 -150 -140 sub CATATA--TTGTAAACGCTTTATTTAAAAAATCC--AAATATTTAAACTTTAATTTTAAG hal TGTGTACGTTCAAAAAGATGGATGTTAAACATCTGTAAAGGATTACAATTCTATTTTA.. ste .AAATA--AGGCTAACGCCATGTTGCAAGAA............................. -130 -120 -110 -100 -90 -80 sub CACATGGGATCTTTGAGAAGTAATTTCTTCTTACTTCTGCTATGATAATACGTAAATGCT hal ............TTGACAAGTAAGCGCTTCTTATTCCTCCTTTGACATAACTT....... ste ....TGCGATCCAGGAGGAGTA.............TCTGCTAAAATAA............ -70 -60 -50 -40 -30 -20 sub AAATTGGGTGTGACATC hal ................. ste ................. -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...