Similar regions between promoters of ylmH
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TTATTAATCACAATATACTCATTTGCCCTGATCATATATATTTTTATGTCATGGGTGCCG hal .....AATCACAATTTATTCTTACATGATTATTGGATATATTCTCATGTCTTGGTTTCCA ste ............................................................ -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub AGTACGAGGGAAACAGCAGTCGGGCGTTTTTTGGCTTCGATTTGTGAACCATATCTCGAA hal AACGCGAGGGAGTCATCATTCGGTCAATTTTTAGGTTCTATCGTGGAGCCTTACTTGGCG ste ...................TCGGACAGATGTTGGCCGCCATTTGCGAGCCGTATTTGGAG -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub CCATTCAGAAAAATCATCCCTCCGATTGCAATGCTGGATATTTCACCAATCGTAGCAATA hal CCGTTCCGCAAAATCATTCCTCCGCTCGGGATGATTGACATCTCTCCAATTGTCGCGATT ste CCGTTTCGGCGCGTCATTCCGCCGCTTGGCATCATTGACGTCTCCCCAATCGTCGCGTTT -180 -170 -160 -150 -140 -130 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>>>>>>>> sub CTTGTGCTTCGGTTTGCGACAACCGGCTTGTGGGGAC-TTTATCGCATGATTGCGTTTTA hal TTTGCCCTGACGTTTGC........................................... ste ATCGTTCTTGAATTCGCGACGAGAGG.TTGTGGGTTCCTTTCTTCCATGAAAGC...... -120 -110 -100 -90 -80 -70 > sub ATGTGACAGTTTGATAGGGGCTTGGCAGCAGCCAAGCCTCTTTACATAGAAGGGAAAGAC hal ..GTGACACTTTG............................................... ste ...................GCTTGGCATCATTGACGTCTC.................... -60 -50 -40 -30 -20 -10 sub G hal . ste . -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...