Similar regions between promoters of ynzD
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< sub TGGGTAAAGCGGCAGGCAGCAAGGCGAAATAAAGGATAAAAACCCCGCTCCGAATGTCAA hal .........................................AGCCTGCAACTAACGTCAC ste ..............GCCATCGAGGCGAAAAA............................. -300 -290 -280 -270 -260 -250 <<<<<<<<<<<<<<<<<<<<< sub AAAATAATTCACGTCTCCCATGTCATCATCCCTTCATGATTTGACATTCCTTCAAGTTAT hal AAATGAAATCAC---TACGACGG-ATAATCGTTTCATTATCTCCCCTCCTTT........ ste ......................................................AATTTT -240 -230 -220 -210 -200 -190 sub GACAAAATCATTTCATTTTTTTAACAC-TTTCACTTGAAGGA-TTTCTATTTTCAGAAAA hal ...ATAATCGTTTCATTATCTCCCCTCCTTTTGATTATAGTT-TTCCTAT.......... ste GTCTAAATTAGGAAATTTATCACTTAT-TTTCCC--GAATCACTTTCTTTTTTC...... -180 -170 -160 -150 -140 -130 sub AACTTATA-TAATTTAATTTGACATTGAGACATTATACTCCTTCTCATTTGAAAATTA-G hal AAATTCTACTACTTTTGAGTAATATTGACTTTTTTTAGTGAACCTCTTTTCAA---TC-G ste ................ATTCGCCATCGAGGCGAAAAAGTCCTGTTTTTTGTAGAATTTTG -120 -110 -100 -90 -80 -70 sub TATAAATATGGATATAATATAAACATTCACTTTGAAGATCTAATGTATGAAAGGATACAT hal TCAGAAATTGACTATAATA......................................... ste TCTAAATTAGGAAAT............................................. -60 -50 -40 -30 -20 -10 sub CCCT hal .... ste .... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...