Similar regions between promoters of yojE
sub CATCAGGTTTTGCATCAGGTTTGGCGGGATGTTCTTTTTGGGGGAGAGGATCGCGGAAAG hal ........................................................AATT ste .............................TGTTCATTTT....GAAATGATCATGGAAAA -300 -290 -280 -270 -260 -250 sub GAAATTGAGCCGCATAATCACTGCCGAACACACTTTCCATCACACGATTGACATACGTTT hal GAAATACGCCCGATAAATCTCT...........TATCCATCAAACGAAAGTCATTCG... ste GGA......................................................... -240 -230 -220 -210 -200 -190 sub CAACTTCTTTCGGATCAGCTTTTTTTAATGCTTCTTTAGAAAATTGATTGTGGAAAGGAA hal .....................TTGTTATTGAATTTTCAGAAGAT................ ste ......................TTTTACTGATTATT.ACAGAAATGATCATGGAAAAGGA -180 -170 -160 -150 -140 -130 sub AGTACTTGTTCCACTCAAACATTGTCTTCACATCCTTTCTTCACGGACAAAATAGTATAT hal ..............TCCATCGATGAGTTCTCATGTTTTCCTCCCTGACA........... ste ................................TCGCTTGATGAGCGAAAAAATA...... -120 -110 -100 -90 -80 -70 sub GCCCACCAGATCTTTCACGTGATATAATATAAGATGCTCTAAAGAAAGGCAGGGATATCA hal ....ACTAGATCTATCCATTGTTAT............TCAAACGAAAGTCA......... ste .............TTGATGAGCGAAAAAATAAGA.......AAGAAAGGGCGG....... -60 -50 -40 -30 -20 -10 -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...