Similar regions between promoters of ypmQ
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub TTACATCACCATTTGCAATTCTACTTAAAAGAAGTGTTTTCATCAAACAGCAGGGCAAAA hal .........CATTTACTTTTTTAGAAACAAGAATGGA--TCAACAATTAGCTGG...... ste ..................................TTTTATTATATAACAGAAAAACGAAA -300 -290 -280 -270 -260 -250 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> sub GTGTATTCTTTCCGACATTATATGAAGCGGCGGATGAAGTGGGCAGATTATCAGGCTGTA hal ........................................................TGTA ste GTGCAAGCCTT................................................. -240 -230 -220 -210 -200 -190 >>>>>>>>>>>>>>>>> >>>>>>>>>>>>>>>> ]]]]]]]]]]]] sub TTTCATCAAGAGGTGTT-AAAGCACAACGCGTAACATGCCGTTTTTTACCTGCATGCCCT hal TTTAAACAATGGTTATCGAAAGAAAAAC................................ ste ................................AACATCGCGATTTTTTC.TGCAAGCCTT -180 -170 -160 -150 -140 -130 ]]]]]]]]] ]]]]]]]]]]]]]]]]]]]]]]]] sub CCTTTGTAA---TCGTTAATGGGGAGGCATGCAGGATTTTTTTTGCTCAGTATCGAATAC hal ..............................................TCAGTATTTAAT.. ste TTTTTGAAACTTTTTTTAATTGGGA....TGCAAGCCTTTTTTTG.TTATTATATAACAG -120 -110 -100 -90 -80 -70 sub AAACATGGGACAGTAAGGACGGTTTTAGAAAGCGTTTTTATGCTGGCTGGAAAGGATGGA hal ..................ACTTTTTTAGAAA............TGGGCGGAAGTGATGG. ste AAAAACGAAAGTGCAAGC-CTTTTTTTGAAACTTTTTTTA.................... -60 -50 -40 -30 -20 -10 sub TGTC hal .... ste .... -1 > : other CDS - : gaps within a similar region ] : terminator . : gaps between similar regions } : RNAs @ : known binding sites <,[,{ : opposite direction About alignment...